Faculty for Chemistry and Pharmacy - Group of Prof. Zipse
 

Isodesmic Reactions

Isodesmic reactions are defined (see comments in W. J. Hehre, R. Ditchfield, L. Radom, J. A. Pople,
J. Am. Chem. Soc. 1970, 92, 4796) as

" . . chemical changes in which there is retention of the number of bonds
of a given formal type, but with a change in their relation to one another".

Isodesmic reactions represent a subclass of isogyric reactions, the latter of which are defined as transformations in which reactants and products have the same number of electron pairs. These reactions can, in principle, be purely hypothetical. To illustrate the concept with one of the original examples, let us consider the reaction of methyl ketene with methane:



On the reactant as well as the product side one can identify the following bond types: 1 C-C single bond, 1 C-C double bond, 12 C-H single bonds, 1 C-O double bond. This is also an example of a bond separation reaction, in which the bonds between non-hydrogen atoms are cleaved such that the simple most diatomic molecules are generated. Due to the constant number of bonds of a given type, the reaction energies of isodesmic reactions can be predicted quite accurately already with relatively cheap theoretical methods. This property makes isodesmic reactions a valuable tool for the prediction of the heat of formation of unknown organic compounds. In order to illustrate the procedure, let us consider the reaction of ethanol with methane:



After accounting for all different bond types involved in this reaction equation, it is clear that this reaction does classify as an isodesmic reaction. The (standard state) heats of formation for three of the four species are known to good accuracy and are given below the equation. The heat of formation of the fourth species (ethanol) can be estimated now by simply calculating the reaction energy ERXN (or better: the reaction enthalpy HRXN), with quantum mechanical methods and by using the computed reaction energy together with the known heats of formation to estimate that of ethanol:



Using cheaply calculated HF/STO-3G energies for all four species, a reaction energy of +10.9 kJ/mol is predicted. Together with the know heats of formation, a value of -220 kJ/mol is predicted for ethanol. This has to be compared to the experimental value of -235.3 kJ/mol.

The success of this procedure strongly depends on the quality of the available heats of formation. It should also be remembered that different isodesmic reactions can be set up in order to estimate the heat of formation of one and the same species. Different isodesmic reactions will give different results without one being systematically better than the other. In case the heats of formation of all involved species are known to good accuray, isodesmic reactions can also be used to validate theoretical methods.

Isodesmic reactions can also be used to quantify the stability of reactive intermediates in a thermochemical sense. If, for example, we want to quantify the stability of the methanol-1-yl radical, we could simply use the bond dissociation energy of the methanol C-H bonds. This is synonymous to calculating the reaction energy for the following reaction:



While the energy of this reaction will without question reflect the stability of the two product radicals, theoretical prediction is by no means straight forward. The electron correlation energies will be substantially different in the closed shell reactant and in the two open shell products, requiring a sophisticated treatment of electron correlation effects. Using an appropriate isodesmic reaction such as



simplifies the situation considerably. This hydrogen transfer reaction between methanol and methyl radical can be constructed as the difference between the C-H bond dissociation reactions in methane and in methanol. The reaction energy of this isodesmic reaction therefore reflects the difference in C-H bond dissociation energies in methane and methanol and thus the differential stability of the methyl and the methanol radical. Using experimentally determined heats of formation at 298.15K of -17.8 kJ/mol (methanol radical), -74.87 kJ/mol (methane), -201.1 kJ/mol (methanol), and +145.69 kJ/mol (methyl radical) one arrives at an isodesmic heat of reaction of -37.3 kJ/mol. This implies that the methanol radical is substantially more stable than the methyl radical. Similar considerations lead to a gain in radical stability of -17.8 kJ/mol on going from the methyl to the ethyl radical.

Homodesmotic reactions are a subclass of isodesmic reactions in which reactants and products share even larger similarity. Various definitions have been given for this class in the past and the most consistent one (S. E. Wheeler, K. N. Houk, P. v. R. Schleyer, W. D. Allen, J. Am. Chem. Soc. 2009, 131, 2547 - 2560) defines homodesmotic reactions as those having

"(a) equal numbers of each type of carbon-carbon bond [Csp3-Csp3, Csp3-Csp2, Csp3-Csp, Csp2-Csp2, Csp2-Csp, Csp-Csp, Csp2=Csp2, Csp2=Csp, Csp=Csp, Csp�Csp] in reactants and products, and (b) equal numbers of each type of carbon atom (sp3, sp2, sp) with zero, one, two, and three hydrogens attached in reactants and products."

An example illustrating this definition is as follows:



In this case reactants and products contain equal numbers of bonds between equivalent centers and hydrogens bound to identical atom types. This can most easily be seen by listing all occurences in table format:

 bond type   occurences   H-type   occurences 
Csp3-Csp3 0 Csp3-3H 1
Csp3-Csp2 1 Csp3-2H 0
Csp3-Csp 0 Csp3-1H 0
Csp2-Csp2 1 Csp3-0H 0
Csp2-Csp 1 Csp2-2H 3
Csp-Csp 0 Csp2-1H 2
Csp2=Csp2 3 Csp2-0H 1
Csp2=Csp 0 Csp-1H 1
Csp=Csp 0 Csp-0H 1
Cspâ�¡Csp 1    



The term homodesmic reaction is sometimes used as a synonym and abbreviation for homodesmotic reaction, but is not clearly defined.


last changes: 24.04.2009, HZ
questions & comments to: zipse@cup.uni-muenchen.de